Index

B

braincoder.utils.calibration module

C

calibration_summary() (in module braincoder.utils.calibration)

cv_scores_ (braincoder.noise.LowRankNoise attribute)

D

dof (braincoder.noise.LowRankNoise attribute)

E

EncodingModel (class in braincoder.models)

F

factors (braincoder.noise.LowRankNoise attribute) fit() (braincoder.noise.LowRankNoise class method) (braincoder.optimize.ParameterFitter method) (braincoder.optimize.ResidualFitter method) (braincoder.optimize.WeightFitter method)

fit_lowrank_omega() (in module braincoder.noise) from_residuals() (braincoder.noise.LowRankNoise class method)

G

get_paradigm() (braincoder.models.EncodingModel method) get_parameter_labels() (braincoder.models.EncodingModel method)

get_stimulus_pdf() (braincoder.models.EncodingModel method) grid_log_likelihood() (braincoder.noise.LowRankNoise method)

H

hdi_coverage() (in module braincoder.utils.calibration)

hpd_level() (in module braincoder.utils.calibration) HRFModel (class in braincoder.hrf)

K

k (braincoder.noise.LowRankNoise attribute)

L

LinearModelWithBaseline (class in braincoder.models) LinearModelWithBaselineHRF (class in braincoder.models) log_prob() (braincoder.noise.LowRankNoise method)

log_prob_backend() (braincoder.noise.LowRankNoise method) log_score() (in module braincoder.utils.calibration) LowRankNoise (class in braincoder.noise)

M

mahalanobis() (braincoder.noise.LowRankNoise method) marginalize() (in module braincoder.utils.calibration)

module braincoder.utils.calibration

P

ParameterFitter (class in braincoder.optimize) pit() (in module braincoder.utils.calibration) plot_calibration() (in module braincoder.utils.calibration)

posterior_grid() (in module braincoder.utils.calibration) predict() (braincoder.models.EncodingModel method) predict_stimulus_grid() (braincoder.models.EncodingModel method) psi (braincoder.noise.LowRankNoise attribute)

R

ResidualFitter (class in braincoder.optimize)

S

scale (braincoder.noise.LowRankNoise attribute) simulate() (braincoder.models.EncodingModel method)

spm_hrf() (in module braincoder.hrf) SPMHRFModel (class in braincoder.hrf) summary() (braincoder.noise.LowRankNoise method)

T

temperature (braincoder.noise.LowRankNoise attribute)

to_dense() (braincoder.noise.LowRankNoise method) true_stimulus_index() (in module braincoder.utils.calibration)

V

voxels (braincoder.noise.LowRankNoise attribute)

W

WeightFitter (class in braincoder.optimize)